Extract results for executive summary

Extract statistical test results for Executive Summary section at beginning of an RSF.

Usage

extract_km(data, var, outcome, args, digits = 3)

extract_cox(x, var, outcome)

Arguments

data

data frame with clinical variables and outcomes

var

variable name

outcome

survival outcome. One of "os", "dss", "pfs".

args

list of arguments for survival analyses

digits

number of digits to round p-value

x

an object from result of doCoxphGeneric() or doCoxphMultivariable()

Value

Extracted result that can be used in the form of inline text as part of the Executive Summary.

Details

• extract_km() extracts the Kaplan-Meier Log Rank test p-value for a specified variable

• extract_cox() extracts Cox proportional hazards model hazard ratios with confidence intervals and LRT p-values for a specified variable

Author

Derek Chiu