Plot Kaplan-Meier curves

KM plots with basic annotations.

Usage

plotKM(
  input.d,
  input.formula,
  main.text = "",
  xlab.text = "",
  ylab.text = "",
  line.name,
  line.color,
  line.pattern = NULL,
  line.width = NULL,
  show.test = "single",
  single.test.type = "logrank",
  digits = 3,
  obs.survyrs = 3,
  legend.pos = "bottomleft",
  file.name = "no.file",
  file.width = 7,
  file.height = 7,
  grey.scale = FALSE,
  show.single.test.pos = 0.1,
  xlabs = NULL,
  legend.xy = NULL,
  ylabs = NULL,
  timeby = NULL,
  ...
)

Arguments

input.d: input data.frame
input.formula: survival formula to Surv
main.text: plot title
xlab.text: x-axis label
ylab.text: y-axis label
line.name: name of legend
line.color: line colour of survival curves
line.pattern: line pattern of survival curves
line.width: line width of survival curves
show.test: show single or the reference group value (for pairwise comparisons). If "none", then no test is show.
single.test.type: test to show if specified show.test = "single". Possible choices are "logrank" (default), "wilcoxon", "taroneware", or "all".
digits: number of digits for p-value
obs.survyrs: show the observed survival years survival rate on KM plot
legend.pos: legend position keyword
file.name: name of file to save plot to
file.width: width of figure in saved file
file.height: height of figure in saved file
grey.scale: logical. If TRUE, the plot will be in grey scale.
show.single.test.pos: position to show single test; defaults to 0.5 if legend.pos = "top". Otherwise 0.1
xlabs: dummy param to match ggkm so they don't get passed to ...
legend.xy: dummy param to match ggkm so they don't get passed to ...
ylabs: dummy param to match ggkm so they don't get passed to ...
timeby: dummy param to match ggkm so they don't get passed to ...
...: additional arguments to plotKMDetail

Author

Samuel Leung

Usage

Arguments

See also

Author